Featured Publications
Methods for development and application of data standards in an ontology-driven information model for measuring, managing, and computing social determinants of health for individuals, households, and communities evaluated through an example of asthma
Rousseau JF, Oliveira E, Tierney WM, Khurshid A, 2022 Dec 136
AI-generated text may have a role in evidence-based medicine
Peng Y, Rousseau JF, Shortliffe EH, Weng C, 2023 Jul 29 1593-1594
Can emergency department provider notes help to achieve more dynamic clinical decision support?
Rousseau JF, Ip IK, Raja AS, Schuur JD, Khorasani R, 2020 Dec 1 1269-1277
Early identification of patients at risk for iron-deficiency anemia using deep learning techniques
Nelly Estefanie Garduno-Rapp, Yee Seng Ng, Jenny L Weon, Sameh N Saleh, Christoph U Lehmann, Chenlu Tian, Andrew Quinn. American Journal of Clinical Pathology, Volume 162, Issue 3, September 2024, Pages 243–251.
Garduno Rapp, N.E., Herzberg, S.D., Ong, H.H., Kao, C., Lehmann, C.U., Gangireddy, S., Jain, N.B., Giri, A., 2025.
Standardizing Phenotypic Algorithms for the Classification of Degenerative Rotator Cuff Tear from Electronic Health Record Systems
Simone Herzberg, Nelly Estefanie Garduno-Rapp, Henry Ong, Srushti Gangireddy, Anoop Chandrashekar, Wei-Qi Wei, Lance LeClere, Wanqing Wen, Katherine Hartmann, Nitin Jain, Ayush Giri, medRxiv 2024.09.29.24314565
Other Publications
Lopez MA, Reznik SJ, Klodnick VV, Cohen D, Myers N, Rousseau JF, Aksan N, de Oliveira E, Strakowski SM
2025 Feb
276
1-7
IgM N-glycosylation correlates with COVID-19 severity and rate of complement deposition
Author Collaboration ID, Author Collaboration IS, Author Collaboration IC, Author Collaboration IC, Author Collaboration IN, Author Collaboration IS, Author Collaboration C&, Haslund-Gourley BS, Woloszczuk K, Hou J, Connors J, Cusimano G, Bell M, Taramangalam B, Fourati S, Mege N, Bernui M, Altman MC, Krammer F, van Bakel H, Maecker HT, Rouphael N, Diray-Arce J, Wigdah B, Kutzler MA, Cairns CB, Haddad EK, Comunale MA, Ozonoff A, Ehrlich LI, Melamed E, Sesma AF, Simon V, Pulendran B, Nadeau KC, Davis MM, McCoey GA, Sekaly R, Baden LR, Levy O, Schaenman J, Reed EF, Shaw AC, Hafler DA, Montgomery RR, Kleinstein SH, Becker PM, Augustine AD, Calfee CS, Erle DJ, Debakey ME, Corry DB, Kheradmand F, Atkinson MA, Brakenridge SC, Agudelo Higuita NI, Rousseau JF 2024 Dec 15Hidden flaws behind expert-level accuracy of multimodal GPT-4 vision in medicine
Jin Q, Chen F, Zhou Y, Xu Z, Cheung JM, Chen R, Summers RM, Rousseau JF, Ni P, Landsman MJ, Baxter SL, Al’Aref SJ, Li Y, Chen A, Brejt JA, Chiang MF, Peng Y, Lu Z 2024 Dec 7
Graham SS, Harrison KR, Edward JC, Majdik ZP, Barbour JB, Rousseau JF
2024 Sep
16
489-505
Patient Characteristics, Management, and Outcomes in a Novel Cohort of Primary Hyperparathyroidism
Sant VR, Elnakieb Y, Lehmann C, Rousseau JF, Maalouf NM 2024 Aug 8
Dodd CG, Kirk CL, Rathouz PJ, Custer J, Garrett AS, Taylor L, Rousseau JF, Claasen C, Morgan MM, Newport DJ, Wagner KD, Nemeroff CB
2024 Aug
37
606-616
Srivastava AV, Brown R, Newport DJ, Rousseau JF, Wagner KD, Guzick A, Devargas C, Claassen C, Ugalde IT, Garrett A, Gushanas K, Liberzon I, Cisler JM, Nemeroff CB
2024 Apr
334
Zhou R, Johnson KE, Rousseau JF, Rathouz PJ, Wilcox AB, Lee AM, Graves A, Anzalone A, Manna A, Saha A, Olex A, Zhou A, Williams AE, Southerland A, Girvin AT, Walden A, Sharathkumar AA, Amor B, Bates B, Hendricks B, Patel B, Alexander C, Bramante C, Ward-Caviness C, Madlock-Brown C, Suver C, Chute C, Dillon C, Wu C, Schmitt C, Takemoto C, Housman D, Gabriel D, Eichmann DA, Mazzotti D, Brown D, Boudreau E, Hill E, Zampino E, Carlson Marti E, Pfaff ER, French E, Koraishy FM, Mariona F, Prior F, Sokos G, Martin G, Lehmann H, Spratt H, Mehta H, Liu H, Sidky H, Hayanga JW, Pincavitch J, Clark J, Harper JR, Islam J, Ge J, Gagnier J, Saltz JH, Saltz J, Loomba J, Buse J, Mathew J, Rutter JL, McMurry JA, Guinney J, Starren J, Crowley K, Bradwell KR, Walters KM, Wilkins K, Gersing KR, Cato KD, Murray K, Kostka K, Northington L, Pyles LA, Misquitta L, Cottrell L, Portilla L, Deacy M, Bissell MM, Clark M, Emmett M, Saltz MM, Palchuk MB, Haendel MA, Adams M, Temple-O'Connor M, Kurilla MG, Morris M, Qureshi N, Safdar N, Garbarini N, Sharafeldin N, Sadan O, Francis PA, Burgoon PW, Robinson P, Payne PR, Fuentes R, Jawa R, Erwin-Cohen R, Patel R, Moffitt RA, Zhu RL, Kamaleswaran R, Hurley R, Miller RT, Pyarajan S, Michael SG, Bozzette S, Mallipattu S, Vedula S, Chapman S, O'Neil ST, Setoguchi S, Hong SS, Johnson S, Bennett TD, Callahan T, Topaloglu U, Sheikh U, Gordon V, Subbian V, Kibbe WA, Hernandez W, Beasley W, Cooper W, Hillegass W, Tanner Zhang X
2024 Mar
19
Dasgupta P, Ou A, Lin H, Gregory T, Alfaro-Munoz KD, Yuan Y, Afshar-Khargan V, Kamiya-Matsuoka C, Rousseau JF, Majd NK
2024 Mar
167
181-188
Clinical and molecular determinants of bleeding-related adverse outcomes in high-grade glioma
Dasgupta P, Rousseau JF 2024 Feb 166 569-574
Aksan N, Guzick AG, Taylor L, Richmond R, Liberzon I, Cross J, Garza C, Rousseau J, Shahidullah JD, Clark SL, Rathouz PJ, Dodd CG, Cisler J, Newport DJ, Wagner KD, Nemeroff CB
2024 Jan
345
94-102
Author Collaboration IN, Author Collaboration IS, Author Collaboration C&, Author Collaboration ID, Author Collaboration IS, Author Collaboration IC, Author Collaboration IC, Ozonoff A, Jayavelu ND, Liu S, Melamed E, Milliren CE, Qi J, Geng LN, McComsey GA, Cairns CB, Baden LR, Schaenman J, Shaw AC, Samaha H, Seyfert-Margolis V, Krammer F, Rosen LB, Steen H, Syphurs C, Dandekar R, Shannon CP, Sekaly RP, Ehrlich LI, Corry DB, Kheradmand F, Atkinson MA, Brakenridge SC, Agudelo Higuita NI, Metcalf JP, Hough CL, Messer WB, Pulendran B, Nadeau KC, Davis MM, Sesma AF, Simon V, van Bakel H, Kim-Schulze S, Hafler DA, Levy O, Kraft M, Bime C, Haddad EK, Calfee CS, Erle DJ, Langelier CR, Eckalbar W, Bosinger SE, Peters B, Kleinstein SH, Rousseau JF
2024 Jan
15
Evaluating large language models on medical evidence summarization
Tang L, Sun Z, Idnay B, Nestor JG, Soroush A, Elias PA, Xu Z, Ding Y, Durrett G, Rousseau JF, Weng C, Peng Y 2023 Dec 6Characterizing patterns of substance use in trauma exposed youth
Clark SL, Dodd CG, Taylor L, Stewart S, Yang N, Shahidullah JD, Guzick AG, Richmond R, Aksan N, Rathouz PJ, Rousseau JF, Newport DJ, Wagner KD, Nemeroff CB 2023 Nov 167 1-9Relationship of Heterologous Virus Responses and Outcomes in Hospitalized COVID-19 Patients
Author Collaboration IN, Rosenberg-Hasson Y, Holmes TH, Diray-Arce J, Chen J, Kellogg R, Snyder M, Becker PM, Ozonoff A, Rouphael N, Reed EF, Maecker HT, Al Ozonoff O, Diray-Arce J, Milliren CE, McEnaney K, Barton B, Lentucci C, Saluvan M, Chang AC, Hoch A, Albert M, Shaheen T, Kho AT, Liu S, Thomas S, Chen J, Murphy MD, Cooney M, Syphurs C, Hayati AN, Bryant R, Abraham J, Schaenman J, Reed EF, Salehi-Rad R, Elashoff D, Brook J, Ramires-Sanchez E, Llamas M, Rivera A, Perdomo C, Ward DC, Magyar CE, Fulcher J, Pickering HC, Sen S, Jayavelu ND, Altman MC, Presnell S, Rousseau J 2023 Oct 211 1224-1231AI-generated text may have a role in evidence-based medicine
Peng Y, Rousseau JF, Shortliffe EH, Weng C 2023 Jul 29 1593-1594
Author Collaboration IN, Diray-Arce J, Fourati S, Doni Jayavelu N, Patel R, Maguire C, Chang AC, Dandekar R, Qi J, Lee BH, van Zalm P, Schroeder A, Chen E, Konstorum A, Brito A, Gygi JP, Kho A, Chen J, Pawar S, Gonzalez-Reiche AS, Hoch A, Milliren CE, Overton JA, Westendorf K, Abraham J, Adkisson M, Albert M, Altamirano Torres L, Alvarenga B, Anderson ML, Anderson EJ, Arnett A, Asashima H, Atkinson MA, Baden LR, Barton B, Beach K, Beagle E, Becker PM, Bell MR, Bernui M, Bime C, Boddapati Kumar A, Booth LJ, Borresen B, Brakenridge SC, Bristow L, Bryant R, Calfee CS, Carreño Manuel J, Rousseau JF
2023 Jun
4
Aguirre A, Hilsabeck RC, O’Mahar K, Carberry KE, Ayers G, Bertelson J, Rousseau JF, Paydarfar D
2023
37
254-261
Less Likely Brainstorming: Using Language Models to Generate Alternative Hypotheses
Tang L, Peng Y, Wang Y, Ding Y, Durrett G, Rousseau JF 2023 12532-12555
Jaiswal A, Chen T, Rousseau JF, Peng Y, Ding Y, Wang Z
2023
4976-4985
Understanding Factual Errors in Summarization: Errors, Summarizers, Datasets, Error Detectors
Tang L, Goyal T, Fabbri AR, Laban P, Xu J, Yavuz S, Kryściński W, Rousseau JF, Durrett G 2023 11626-11644A Content Analysis of Self-Reported Financial Relationships in Biomedical Research
Graham SS, Sharma N, Karnes MS, Majdik ZP, Barbour JB, Rousseau JF 2023 14 91-98
Rousseau JF, Oliveira E, Tierney WM, Khurshid A
2022 Dec
136
Navar AM, Kolkailah AA, Overton R, Shah NP, Rousseau JF, Flaker GC, Pignone MP, Peterson ED
2022 Nov
11
Valtchinov VI, Murphy SN, Lacson R, Ikonomov N, Zhai BK, Andriole K, Rousseau J, Hanson D, Kohane IS, Khorasani R
2022 Nov
29
1870-1878
Shao Q, Rascati KL, Lawson KA, Barner JC, Sonawane KB, Rousseau JF
2022 Nov
28
1272-1281
Evidence for stratified conflicts of interest policies in research contexts: a methodological review
Graham SS, Karnes MS, Jensen JT, Sharma N, Barbour JB, Majdik ZP, Rousseau JF 2022 Sep 12
Author Collaboration tI, Ozonoff A, Schaenman J, Jayavelu ND, Milliren CE, Calfee CS, Cairns CB, Kraft M, Baden LR, Shaw AC, Krammer F, van Bakel H, Esserman DA, Liu S, Sesma AF, Simon V, Hafler DA, Montgomery RR, Kleinstein SH, Levy O, Bime C, Haddad EK, Erle DJ, Pulendran B, Nadeau KC, Davis MM, Hough CL, Messer WB, Higuita NI, Metcalf JP, Atkinson MA, Brakenridge SC, Corry D, Kheradmand F, Ehrlich LI, Melamed E, McComsey GA, Sekaly R, Diray-Arce J, Peters B, Augustine AD, Reed EF, Altman MC, Becker PM, Rouphael N, Bime C, McEnaney K, Barton B, Lentucci C, Saluvan M, Rousseau JF
2022 Sep
83
Wang S, Tang L, Majety A, Rousseau JF, Shih G, Ding Y, Peng Y
2022 Aug
132
Graham SS, Majdik ZP, Barbour JB, Rousseau JF
2022 Jun
405-409
Shao Q, Rascati KL, Barner JC, Lawson KA, Sonawane KB, Rousseau JF
2022 Feb
62
141-158
Old can be Gold: Better Gradient Flow can Make Vanilla-GCNs Great Again
Jaiswal A, Wang P, Chen T, Rousseau JF, Ding Y, Wang Z 2022EchoGen: A New Benchmark Study on Generating Conclusions from Echocardiogram Notes
Tang L, Kooragayalu S, Wang Y, Ding Y, Durrett G, Rousseau JF, Peng Y 2022 359-368RoS-KD: A Robust Stochastic Knowledge Distillation Approach for Noisy Medical Imaging
Jaiswal A, Ashutosh K, Rousseau JF, Peng Y, Wang Z, Ding Y 2022 981-986A dashboard for exploring clinical trials sponsorship and potential virtual monopolies
Graham SS, Majdik ZP, Barbour JB, Rousseau JF 2021 Oct 4
Rousseau JF, Tierney WM
2021 Mar
28
664-665
RadBERT-CL: Factually-Aware Contrastive Learning For Radiology Report Classification
Jaiswal A, Tang L, Ghosh M, Rousseau JF, Peng Y, Ding Y 2021 158 196-206
Jaiswal A, Li T, Zander C, Han Y, Rousseau JF, Peng Y, Ding Y
2021
1132-1137
Xu J, Kim S, Song M, Jeong M, Kim D, Kang J, Rousseau JF, Li X, Xu W, Torvik VI, Bu Y, Chen C, Ebeid IA, Li D, Ding Y
2020 Dec
7
Can emergency department provider notes help to achieve more dynamic clinical decision support?
Rousseau JF, Ip IK, Raja AS, Schuur JD, Khorasani R 2020 Dec 1 1269-1277
Li X, Rousseau JF, Ding Y, Song M, Lu W
2020 Jun
8
Wanyan T, Kang M, Badgeley MA, Johnson KW, De Freitas JK, Chaudhry FF, Vaid A, Zhao S, Miotto R, Nadkarni GN, Wang F, Rousseau J, Azad A, Ding Y, Glicksberg BS
2020
14-25
Rousseau JF, Ip IK, Raja AS, Valtchinov VI, Cochon L, Schuur JD, Khorasani R
2019
10
189-198
Tierney WM, Rousseau JF, Khurshid A
2018 Feb
114
42-51
Rush B, Rousseau J, Sekhon M, Griesdale DE
2016 Jul
91
652
Pulling it all together: Envisioning a data-driven, ideal care system
Stone D, Rousseau J, Lai Y 2016 Jan 27-42
Rush B, Rousseau J, Sekhon MS, Griesdale DE
2016
88
25-31
Prosodic stress: Acoustic, aphasic, aprosodic and neuroanatomic interactions
Ross ED, Shayya L, Rousseau JF 2013 Sep 26 526-551